==> Synchronizing chroot copy [/home/leming/armv8/root] -> [leming]...done
==> Making package: sz 2.1.12.5-9 (Tue Feb 11 06:27:09 2025)
==> Retrieving sources...
-> Found sz-2.1.12.5.tar.gz
==> WARNING: Skipping verification of source file PGP signatures.
==> Validating source files with sha256sums...
sz-2.1.12.5.tar.gz ... Passed
==> Making package: sz 2.1.12.5-9 (Tue Feb 11 06:27:16 2025)
==> Checking runtime dependencies...
==> Checking buildtime dependencies...
==> Installing missing dependencies...
[?25lresolving dependencies...
looking for conflicting packages...
Packages (18) blas-3.12.1-2 blosc-1.21.6-1 cblas-3.12.1-2 cppdap-1.58.0-2
hicolor-icon-theme-0.18-1 jsoncpp-1.9.6-3 lapack-3.12.1-2
libaec-1.1.3-1 libuv-1.50.0-1 libzip-1.11.2-1 rhash-1.4.4-1
snappy-1.2.1-2 cmake-3.31.5-1
gcc-fortran-14.2.1+r753+g1cd744a6828f-1 hdf5-1.14.5-1
netcdf-4.9.3-2 python-numpy-2.2.2-1 swig-4.3.0-1
Total Installed Size: 209.29 MiB
:: Proceed with installation? [Y/n]
checking keyring...
checking package integrity...
loading package files...
checking for file conflicts...
checking available disk space...
:: Processing package changes...
installing cppdap...
installing hicolor-icon-theme...
installing jsoncpp...
Optional dependencies for jsoncpp
jsoncpp-doc: documentation
installing libuv...
installing rhash...
installing cmake...
Optional dependencies for cmake
make: for unix Makefile generator [installed]
ninja: for ninja generator
qt6-base: cmake-gui
installing gcc-fortran...
installing libaec...
installing hdf5...
installing snappy...
installing blosc...
installing libzip...
installing netcdf...
Optional dependencies for netcdf
netcdf-fortran: fortran bindings
netcdf-cxx: c++ bindings
installing blas...
installing cblas...
installing lapack...
installing python-numpy...
Optional dependencies for python-numpy
blas-openblas: faster linear algebra
installing swig...
:: Running post-transaction hooks...
(1/2) Arming ConditionNeedsUpdate...
(2/2) Updating the info directory file...
[?25h==> Retrieving sources...
-> Found sz-2.1.12.5.tar.gz
==> WARNING: Skipping all source file integrity checks.
==> Extracting sources...
-> Extracting sz-2.1.12.5.tar.gz with bsdtar
==> Starting build()...
-- The C compiler identification is GNU 14.2.1
-- The CXX compiler identification is GNU 14.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/lib/distcc/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib/distcc/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- No build type was set. Setting build type to Release.
-- Looking for include file unistd.h
-- Looking for include file unistd.h - found
-- Looking for include file sys/time.h
-- Looking for include file sys/time.h - found
-- Looking for gettimeofday
-- Looking for gettimeofday - found
-- Looking for clock_gettime
-- Looking for clock_gettime - found
-- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0")
-- Checking for one of the modules 'libzstd'
-- Found ZLIB: /usr/lib/libz.so (found version "1.3.1")
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- The Fortran compiler identification is GNU 14.2.1
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/gfortran - skipped
CMake Warning at CMakeLists.txt:117 (message):
The python bindings for SZ are deprecated. Please consider using the
Python bindings for
[LibPressio](https://github.com/codarcode/libpressio#python) to use SZ from
python instead.
-- Found SWIG: /usr/bin/swig (found version "4.3.0")
-- Found Python: /usr/bin/python3.13 (found version "3.13.1") found components: Interpreter Development NumPy Development.Module Development.Embed
-- Checking for one of the modules 'netcdf'
-- Found HDF5: /usr/lib/libhdf5.so;/usr/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.a;/usr/lib/libm.so (found version "1.14.5")
-- Configuring done (13.6s)
-- Generating done (0.1s)
-- Build files have been written to: /build/sz/src/build
make: Entering directory '/build/sz/src/build'
[ 1%] Swig compile pysz.i for python
[ 3%] Building C object sz/CMakeFiles/SZ.dir/src/ArithmeticCoding.c.o
[ 3%] Building Fortran object sz/CMakeFiles/SZ.dir/src/rw_interface.F90.o
[ 4%] Building Fortran object sz/CMakeFiles/SZ.dir/src/sz_interface.F90.o
[ 7%] Building C object sz/CMakeFiles/SZ.dir/src/ByteToolkit.c.o
[ 7%] Building C object sz/CMakeFiles/SZ.dir/src/callZlib.c.o
[ 8%] Building C object sz/CMakeFiles/SZ.dir/src/CacheTable.c.o
[ 9%] Building C object sz/CMakeFiles/SZ.dir/src/CompressElement.c.o
[ 10%] Building C object sz/CMakeFiles/SZ.dir/src/conf.c.o
[ 12%] Building C object sz/CMakeFiles/SZ.dir/src/dataCompression.c.o
[ 13%] Building C object sz/CMakeFiles/SZ.dir/src/dictionary.c.o
[ 14%] Building C object sz/CMakeFiles/SZ.dir/src/DynamicByteArray.c.o
[ 15%] Building C object sz/CMakeFiles/SZ.dir/src/DynamicDoubleArray.c.o
[ 16%] Building C object sz/CMakeFiles/SZ.dir/src/DynamicFloatArray.c.o
[ 18%] Building C object sz/CMakeFiles/SZ.dir/src/DynamicIntArray.c.o
[ 19%] Building C object sz/CMakeFiles/SZ.dir/src/Huffman.c.o
[ 20%] Building C object sz/CMakeFiles/SZ.dir/src/iniparser.c.o
[ 21%] Building C object sz/CMakeFiles/SZ.dir/src/MultiLevelCacheTable.c.o
[ 22%] Building C object sz/CMakeFiles/SZ.dir/src/MultiLevelCacheTableWideInterval.c.o
[ 24%] Building C object sz/CMakeFiles/SZ.dir/src/pastri.c.o
[ 25%] Building C object sz/CMakeFiles/SZ.dir/src/exafelSZ.c.o
[ 26%] Building C object sz/CMakeFiles/SZ.dir/src/rw.c.o
[ 27%] Building C object sz/CMakeFiles/SZ.dir/src/rwf.c.o
[ 28%] Building C object sz/CMakeFiles/SZ.dir/src/sz.c.o
[ 30%] Building C object sz/CMakeFiles/SZ.dir/src/szd_double.c.o
[ 31%] Building C object sz/CMakeFiles/SZ.dir/src/szd_double_pwr.c.o
[ 32%] Building C object sz/CMakeFiles/SZ.dir/src/szd_double_ts.c.o
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readByteData':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:157:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readDoubleData_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:485:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readInt8Data_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:522:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readInt16Data_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:559:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readUInt16Data_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:595:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readInt32Data_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:631:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readUInt32Data_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:667:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readInt64Data_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:703:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readUInt64Data_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:739:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c: In function 'readFloatData_systemEndian':
/build/sz/src/SZ-2.1.12.5/sz/src/rw.c:775:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
[ 33%] Building C object sz/CMakeFiles/SZ.dir/src/szd_float.c.o
[ 34%] Building C object sz/CMakeFiles/SZ.dir/src/szd_float_pwr.c.o
[ 36%] Building C object sz/CMakeFiles/SZ.dir/src/szd_float_ts.c.o
/build/sz/src/SZ-2.1.12.5/sz/src/pastri.c: In function 'SZ_pastriReadParameters':
/build/sz/src/SZ-2.1.12.5/sz/src/pastri.c:15:3: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
[ 37%] Building C object sz/CMakeFiles/SZ.dir/src/szd_int16.c.o
[ 38%] Building C object sz/CMakeFiles/SZ.dir/src/szd_int32.c.o
[ 39%] Building C object sz/CMakeFiles/SZ.dir/src/szd_int64.c.o
[ 40%] Building C object sz/CMakeFiles/SZ.dir/src/szd_int8.c.o
[ 42%] Building C object sz/CMakeFiles/SZ.dir/src/sz_double.c.o
[ 43%] Building C object sz/CMakeFiles/SZ.dir/src/sz_double_pwr.c.o
[ 44%] Building C object sz/CMakeFiles/SZ.dir/src/sz_double_ts.c.o
[ 45%] Building C object sz/CMakeFiles/SZ.dir/src/szd_uint16.c.o
[ 46%] Building C object sz/CMakeFiles/SZ.dir/src/szd_uint32.c.o
[ 48%] Building C object sz/CMakeFiles/SZ.dir/src/szd_uint64.c.o
[ 49%] Building C object sz/CMakeFiles/SZ.dir/src/szd_uint8.c.o
[ 50%] Building C object sz/CMakeFiles/SZ.dir/src/szf.c.o
[ 51%] Building C object sz/CMakeFiles/SZ.dir/src/sz_float.c.o
[ 53%] Building C object sz/CMakeFiles/SZ.dir/src/sz_float_pwr.c.o
[ 54%] Building C object sz/CMakeFiles/SZ.dir/src/sz_float_ts.c.o
[ 55%] Building C object sz/CMakeFiles/SZ.dir/src/sz_int16.c.o
[ 56%] Building C object sz/CMakeFiles/SZ.dir/src/sz_int32.c.o
[ 57%] Building C object sz/CMakeFiles/SZ.dir/src/sz_int64.c.o
[ 59%] Building C object sz/CMakeFiles/SZ.dir/src/sz_int8.c.o
[ 60%] Building C object sz/CMakeFiles/SZ.dir/src/sz_omp.c.o
[ 61%] Building C object sz/CMakeFiles/SZ.dir/src/sz_uint16.c.o
[ 62%] Building C object sz/CMakeFiles/SZ.dir/src/sz_uint32.c.o
[ 63%] Building C object sz/CMakeFiles/SZ.dir/src/sz_uint64.c.o
[ 65%] Building C object sz/CMakeFiles/SZ.dir/src/sz_uint8.c.o
[ 65%] Built target pysz_swig_compilation
[ 66%] Building C object sz/CMakeFiles/SZ.dir/src/TightDataPointStorageD.c.o
[ 67%] Building C object sz/CMakeFiles/SZ.dir/src/TightDataPointStorageF.c.o
[ 68%] Building C object sz/CMakeFiles/SZ.dir/src/TightDataPointStorageI.c.o
[ 69%] Building C object sz/CMakeFiles/SZ.dir/src/TypeManager.c.o
[ 71%] Building C object sz/CMakeFiles/SZ.dir/src/utility.c.o
[ 72%] Building C object sz/CMakeFiles/SZ.dir/src/VarSet.c.o
[ 73%] Building C object sz/CMakeFiles/SZ.dir/src/sz_stats.c.o
[ 74%] Linking Fortran shared library libSZ.so
[ 74%] Built target SZ
[ 75%] Building C object example/CMakeFiles/testint_decompress.dir/testint_decompress.c.o
[ 77%] Building C object example/CMakeFiles/testdouble_compress.dir/testdouble_compress.c.o
[ 78%] Building C object example/CMakeFiles/testdouble_decompress.dir/testdouble_decompress.c.o
[ 79%] Building C object example/CMakeFiles/sz.dir/sz.c.o
[ 80%] Building C object example/CMakeFiles/testint_compress.dir/testint_compress.c.o
[ 81%] Building C object example/CMakeFiles/testfloat_compress.dir/testfloat_compress.c.o
[ 83%] Building C object example/CMakeFiles/testfloat_decompress.dir/testfloat_decompress.c.o
[ 84%] Building CXX object swig/CMakeFiles/pysz.dir/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx.o
[ 85%] Linking C executable ../bin/testdouble_compress
[ 86%] Linking C executable ../bin/testfloat_compress
[ 87%] Linking C executable ../bin/testdouble_decompress
[ 89%] Linking C executable ../bin/testfloat_decompress
[ 90%] Linking C executable ../bin/testint_compress
[ 91%] Linking C executable ../bin/testint_decompress
[ 91%] Built target testdouble_compress
/build/sz/src/SZ-2.1.12.5/example/sz.c: In function 'main':
/build/sz/src/SZ-2.1.12.5/example/sz.c:433:5: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/example/sz.c:434:5: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result]
/build/sz/src/SZ-2.1.12.5/example/sz.c:686:5: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result]
[ 92%] Linking C executable ../bin/sz
[ 92%] Built target testfloat_compress
[ 92%] Built target testdouble_decompress
[ 93%] Building C object NetCDFReader/CMakeFiles/netcdfsz.dir/src/NetCDFReader.c.o
[ 95%] Building CXX object swig/CMakeFiles/pysz.dir/pysz.cc.o
[ 95%] Built target testint_compress
[ 96%] Building C object hdf5-filter/H5Z-SZ/CMakeFiles/hdf5sz.dir/src/H5Z_SZ.c.o
[ 97%] Linking C shared library libnetcdfsz.so
[ 97%] Built target sz
[ 97%] Built target testint_decompress
[ 97%] Built target netcdfsz
[ 98%] Linking C shared library libhdf5sz.so
[ 98%] Built target hdf5sz
[ 98%] Built target testfloat_decompress
In file included from /usr/include/c++/14.2.1/aarch64-unknown-linux-gnu/bits/c++allocator.h:33,
from /usr/include/c++/14.2.1/bits/allocator.h:46,
from /usr/include/c++/14.2.1/string:43,
from /usr/include/c++/14.2.1/stdexcept:39,
from /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:3326:
In member function 'void std::__new_allocator<_Tp>::deallocate(_Tp*, size_type) [with _Tp = signed char]',
inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::deallocate(allocator_type&, pointer, size_type) [with _Tp = signed char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:550:23,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:389:19,
inlined from 'std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:368:15,
inlined from 'std::vector<_Tp, _Alloc>::~vector() [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:738:7,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8__SWIG_1(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33913:26,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33940:57:
/usr/include/c++/14.2.1/bits/new_allocator.h:172:26: warning: 'void operator delete(void*, std::size_t)' called on pointer '<unknown>' with nonzero offset [1, 9223372036854775807] [-Wfree-nonheap-object]
172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n));
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]',
inlined from 'static _Tp* std::allocator_traits<std::allocator<_CharT> >::allocate(allocator_type&, size_type) [with _Tp = signed char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:515:28,
inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:380:33,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:398:44,
inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:334:26,
inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:603:61,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8__SWIG_1(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33913:94,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33940:57:
/usr/include/c++/14.2.1/bits/new_allocator.h:151:48: note: returned from 'void* operator new(std::size_t)'
151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp)));
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In member function 'void std::__new_allocator<_Tp>::deallocate(_Tp*, size_type) [with _Tp = signed char]',
inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::deallocate(allocator_type&, pointer, size_type) [with _Tp = signed char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:550:23,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:389:19,
inlined from 'std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:368:15,
inlined from 'std::vector<_Tp, _Alloc>::~vector() [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:738:7,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8__SWIG_0(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33871:26,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33961:59:
/usr/include/c++/14.2.1/bits/new_allocator.h:172:26: warning: 'void operator delete(void*, std::size_t)' called on pointer '<unknown>' with nonzero offset [1, 9223372036854775807] [-Wfree-nonheap-object]
172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n));
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = signed char]',
inlined from 'static _Tp* std::allocator_traits<std::allocator<_CharT> >::allocate(allocator_type&, size_type) [with _Tp = signed char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:515:28,
inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:380:33,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:398:44,
inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:334:26,
inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = signed char; _Alloc = std::allocator<signed char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:603:61,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8__SWIG_0(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33871:94,
inlined from 'PyObject* _wrap_Compressor_DecompressInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33961:59:
/usr/include/c++/14.2.1/bits/new_allocator.h:151:48: note: returned from 'void* operator new(std::size_t)'
151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp)));
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In member function 'void std::__new_allocator<_Tp>::deallocate(_Tp*, size_type) [with _Tp = unsigned char]',
inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::deallocate(allocator_type&, pointer, size_type) [with _Tp = unsigned char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:550:23,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:389:19,
inlined from 'std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:368:15,
inlined from 'std::vector<_Tp, _Alloc>::~vector() [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:738:7,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8__SWIG_1(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33766:26,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33793:58:
/usr/include/c++/14.2.1/bits/new_allocator.h:172:26: warning: 'void operator delete(void*, std::size_t)' called on pointer '<unknown>' with nonzero offset [1, 9223372036854775807] [-Wfree-nonheap-object]
172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n));
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = unsigned char]',
inlined from 'static _Tp* std::allocator_traits<std::allocator<_CharT> >::allocate(allocator_type&, size_type) [with _Tp = unsigned char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:515:28,
inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:380:33,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:398:44,
inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:334:26,
inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:603:61,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8__SWIG_1(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33766:96,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33793:58:
/usr/include/c++/14.2.1/bits/new_allocator.h:151:48: note: returned from 'void* operator new(std::size_t)'
151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp)));
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In member function 'void std::__new_allocator<_Tp>::deallocate(_Tp*, size_type) [with _Tp = unsigned char]',
inlined from 'static void std::allocator_traits<std::allocator<_CharT> >::deallocate(allocator_type&, pointer, size_type) [with _Tp = unsigned char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:550:23,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:389:19,
inlined from 'std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:368:15,
inlined from 'std::vector<_Tp, _Alloc>::~vector() [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:738:7,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8__SWIG_0(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33724:26,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33814:60:
/usr/include/c++/14.2.1/bits/new_allocator.h:172:26: warning: 'void operator delete(void*, std::size_t)' called on pointer '<unknown>' with nonzero offset [1, 9223372036854775807] [-Wfree-nonheap-object]
172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n));
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = unsigned char]',
inlined from 'static _Tp* std::allocator_traits<std::allocator<_CharT> >::allocate(allocator_type&, size_type) [with _Tp = unsigned char]' at /usr/include/c++/14.2.1/bits/alloc_traits.h:515:28,
inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:380:33,
inlined from 'void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:398:44,
inlined from 'std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:334:26,
inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = unsigned char; _Alloc = std::allocator<unsigned char>]' at /usr/include/c++/14.2.1/bits/stl_vector.h:603:61,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8__SWIG_0(PyObject*, Py_ssize_t, PyObject**)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33724:96,
inlined from 'PyObject* _wrap_Compressor_DecompressUInt8(PyObject*, PyObject*)' at /build/sz/src/build/swig/CMakeFiles/pysz.dir/pyszPYTHON_wrap.cxx:33814:60:
/usr/include/c++/14.2.1/bits/new_allocator.h:151:48: note: returned from 'void* operator new(std::size_t)'
151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp)));
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[100%] Linking CXX shared module _pysz.so
[100%] Built target pysz
make: Leaving directory '/build/sz/src/build'
==> Entering fakeroot environment...
==> Starting package()...
make: Entering directory '/build/sz/src/build'
[ 1%] Built target pysz_swig_compilation
[ 74%] Built target SZ
[ 77%] Built target testfloat_compress
[ 79%] Built target testint_decompress
[ 81%] Built target testdouble_compress
[ 86%] Built target testdouble_decompress
[ 86%] Built target sz
[ 89%] Built target testfloat_decompress
[ 91%] Built target testint_compress
[ 95%] Built target pysz
[ 97%] Built target netcdfsz
[100%] Built target hdf5sz
Install the project...
-- Install configuration: "Release"
-- Installing: /build/sz/pkg/sz/usr/share/pkgconfig/sz.pc
-- Installing: /build/sz/pkg/sz/usr/lib/libSZ.so
-- Installing: /build/sz/pkg/sz/usr/share/SZ/cmake/SZConfig.cmake
-- Installing: /build/sz/pkg/sz/usr/share/SZ/cmake/SZConfig-release.cmake
-- Installing: /build/sz/pkg/sz/usr/include/sz
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_double.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_stats.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_uint16.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_uint64.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/pastriF.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/TightDataPointStorageF.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_uint8.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_double_ts.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_int16.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_uint8.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_uint32.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/CacheTable.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_double_ts.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_int32.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/DynamicIntArray.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/pastriD.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/ArithmeticCoding.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/dataCompression.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/pastriGeneral.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_int8.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_float_ts.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_opencl.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_float_pwr.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/iniparser.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_float_ts.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/callZlib.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/exafelSZ.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/DynamicDoubleArray.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/Huffman.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_float_pwr.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_int64.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/CompressElement.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/MultiLevelCacheTableWideInterval.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/rw.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/TypeManager.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_api.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_omp.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_uint64.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_int32.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/TightDataPointStorageI.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_double_pwr.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/TightDataPointStorageD.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_uint32.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_float.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_float.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/VarSet.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_double_pwr.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/DynamicFloatArray.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/pastri.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/defines.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/dictionary.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_int64.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/DynamicByteArray.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/conf.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szf.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/szd_int16.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/MultiLevelCacheTable.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/ByteToolkit.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_double.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_uint16.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/utility.h
-- Installing: /build/sz/pkg/sz/usr/include/sz/sz_int8.h
-- Installing: /build/sz/pkg/sz/usr/bin/testint_compress
-- Installing: /build/sz/pkg/sz/usr/bin/testint_decompress
-- Installing: /build/sz/pkg/sz/usr/bin/testfloat_compress
-- Installing: /build/sz/pkg/sz/usr/bin/testfloat_decompress
-- Installing: /build/sz/pkg/sz/usr/bin/testdouble_compress
-- Installing: /build/sz/pkg/sz/usr/bin/testdouble_decompress
-- Installing: /build/sz/pkg/sz/usr/bin/sz
-- Installing: /build/sz/pkg/sz/usr/lib/python3.13/site-packages/_pysz.so
-- Installing: /build/sz/pkg/sz/usr/lib/python3.13/site-packages/pysz.py
-- Installing: /build/sz/pkg/sz/usr/lib/libnetcdfsz.so
-- Installing: /build/sz/pkg/sz/usr/include/netcdfsz
-- Installing: /build/sz/pkg/sz/usr/include/netcdfsz/NetCDFReader.h
-- Installing: /build/sz/pkg/sz/usr/lib/libhdf5sz.so
-- Installing: /build/sz/pkg/sz/usr/include/hdf5_sz
-- Installing: /build/sz/pkg/sz/usr/include/hdf5_sz/H5Z_SZ.h
make: Leaving directory '/build/sz/src/build'
==> Tidying install...
-> Removing libtool files...
-> Purging unwanted files...
-> Removing static library files...
-> Stripping unneeded symbols from binaries and libraries...
-> Compressing man and info pages...
==> Checking for packaging issues...
==> WARNING: Package contains reference to $srcdir
usr/lib/libhdf5sz.so
usr/lib/libSZ.so
==> Creating package "sz"...
-> Generating .PKGINFO file...
-> Generating .BUILDINFO file...
-> Generating .MTREE file...
-> Compressing package...
==> Leaving fakeroot environment.
==> Finished making: sz 2.1.12.5-9 (Tue Feb 11 06:28:17 2025)
==> Cleaning up...