sata drive not recognized after upgrade uboot and kernel

[hamal]

I've upgraded uboot and switch to kernel-kirkwood for few days.
Everything works fine except hard drive.
/dev/sdb and /dev/sdc are disappeared.
Both sata drives are unfound in dmesg.

[sambul13]

$this->bbcode_second_pass_quote('hamal', 'B')oth sata drives are unfound in dmesg.

[Kurlon]

Hi Hamal, which device are you using, and would you be so kind as to post the output of dmesg? I'm assuming you're booting with the SATA devices attached, correct?

[hamal]

It's a goflex net.
I attach two hard drives and share my file through NFS.

This is the dmest output:
$this->bbcode_second_pass_code('', '
[ 0.000000] Booting Linux on physical CPU 0
[ 0.000000] Initializing cgroup subsys cpuset
[ 0.000000] Initializing cgroup subsys cpu
[ 0.000000] Linux version 3.6.4-1-ARCH (nobody@alarm) (gcc version 4.7.2 (GCC) ) #1 PREEMPT Mon Oct 29 16:22:19 UTC 2012
[ 0.000000] CPU: Feroceon 88FR131 [56251311] revision 1 (ARMv5TE), cr=00053977
[ 0.000000] CPU: VIVT data cache, VIVT instruction cache
[ 0.000000] Machine: Marvell SheevaPlug Reference Board
[ 0.000000] debug: ignoring loglevel setting.
[ 0.000000] Memory policy: ECC disabled, Data cache writeback
[ 0.000000] On node 0 totalpages: 32768
[ 0.000000] free_area_init_node: node 0, pgdat c062ea04, node_mem_map c0700000
[ 0.000000] Normal zone: 256 pages used for memmap
[ 0.000000] Normal zone: 0 pages reserved
[ 0.000000] Normal zone: 32512 pages, LIFO batch:7
[ 0.000000] pcpu-alloc: s0 r0 d32768 u32768 alloc=1*32768
[ 0.000000] pcpu-alloc: [0] 0
[ 0.000000] Built 1 zonelists in Zone order, mobility grouping on. Total pages: 32512
[ 0.000000] Kernel command line: console=ttyS0,115200 root=/dev/sda1 rootdelay=10 rootfstype=ext3 mtdparts=orion_nand:1M(u-boot),4M(uImage),32M(rootfs),-(data) ignore_loglevel netconsole=6665@10.10.10.3/eth0,6666@10.10.10.4/
[ 0.000000] PID hash table entries: 512 (order: -1, 2048 bytes)
[ 0.000000] Dentry cache hash table entries: 16384 (order: 4, 65536 bytes)
[ 0.000000] Inode-cache hash table entries: 8192 (order: 3, 32768 bytes)
[ 0.000000] Memory: 128MB = 128MB total
[ 0.000000] Memory: 122740k/122740k available, 8332k reserved, 0K highmem
[ 0.000000] Virtual kernel memory layout:
vector : 0xffff0000 - 0xffff1000 ( 4 kB)
fixmap : 0xfff00000 - 0xfffe0000 ( 896 kB)
vmalloc : 0xc8800000 - 0xff000000 ( 872 MB)
lowmem : 0xc0000000 - 0xc8000000 ( 128 MB)
modules : 0xbf000000 - 0xc0000000 ( 16 MB)
.text : 0xc0008000 - 0xc05c0200 (5857 kB)
.init : 0xc05c1000 - 0xc05ecfec ( 176 kB)
.data : 0xc05ee000 - 0xc0633400 ( 277 kB)
.bss : 0xc0633424 - 0xc06ffcd4 ( 819 kB)
[ 0.000000] SLUB: Genslabs=13, HWalign=32, Order=0-3, MinObjects=0, CPUs=1, Nodes=1
[ 0.000000] NR_IRQS:114
[ 0.000000] sched_clock: 32 bits at 200MHz, resolution 5ns, wraps every 21474ms
[ 0.000000] Console: colour dummy device 80x30
[ 15.011035] Calibrating delay loop... 1191.11 BogoMIPS (lpj=5955584)
[ 15.100965] pid_max: default: 32768 minimum: 301
[ 15.101085] Security Framework initialized
[ 15.101111] AppArmor: AppArmor disabled by boot time parameter
[ 15.101171] Mount-cache hash table entries: 512
[ 15.101753] Initializing cgroup subsys cpuacct
[ 15.101772] Initializing cgroup subsys devices
[ 15.101783] Initializing cgroup subsys freezer
[ 15.101791] Initializing cgroup subsys net_cls
[ 15.101798] Initializing cgroup subsys blkio
[ 15.101806] Initializing cgroup subsys perf_event
[ 15.101824] Initializing cgroup subsys bfqio
[ 15.101914] CPU: Testing write buffer coherency: ok
[ 15.102212] Setting up static identity map for 0x441298 - 0x4412d4
[ 15.103636] devtmpfs: initialized
[ 15.105555] NET: Registered protocol family 16
[ 15.106753] DMA: preallocated 1024 KiB pool for atomic coherent allocations
[ 15.107496] Kirkwood: MV88F6281-A1, TCLK=200000000.
[ 15.107514] Feroceon L2: Enabling L2
[ 15.107551] Feroceon L2: Cache support initialised.
[ 15.108138] initial MPP regs: 01111111 11113322 00001111 00100000 00000000 00000000 00000000
[ 15.108166] final MPP regs: 01111111 11113322 00001111 00000000 00000000 00000000 00000000
[ 15.113120] bio: create slab <bio-0> at 0
[ 15.113490] vgaarb: loaded
[ 15.113738] SCSI subsystem initialized
[ 15.113882] libata version 3.00 loaded.
[ 15.114068] usbcore: registered new interface driver usbfs
[ 15.114130] usbcore: registered new interface driver hub
[ 15.114226] usbcore: registered new device driver usb
[ 15.114971] Switching to clocksource orion_clocksource
[ 15.127320] FS-Cache: Loaded
[ 15.136442] NET: Registered protocol family 2
[ 15.136922] TCP established hash table entries: 4096 (order: 3, 32768 bytes)
[ 15.137020] TCP bind hash table entries: 4096 (order: 2, 16384 bytes)
[ 15.137072] TCP: Hash tables configured (established 4096 bind 4096)
[ 15.137109] TCP: reno registered
[ 15.137120] UDP hash table entries: 256 (order: 0, 4096 bytes)
[ 15.137140] UDP-Lite hash table entries: 256 (order: 0, 4096 bytes)
[ 15.137341] NET: Registered protocol family 1
[ 15.137372] PCI: CLS 0 bytes, default 32
[ 15.138242] audit: initializing netlink socket (disabled)
[ 15.138278] type=2000 audit(0.120:1): initialized
[ 15.226266] VFS: Disk quotas dquot_6.5.2
[ 15.226460] Dquot-cache hash table entries: 1024 (order 0, 4096 bytes)
[ 15.228560] jffs2: version 2.2. (NAND) © 2001-2006 Red Hat, Inc.
[ 15.229582] aufs 3.6
[ 15.229603] msgmni has been set to 239
[ 15.231084] Block layer SCSI generic (bsg) driver version 0.4 loaded (major 252)
[ 15.231096] io scheduler noop registered
[ 15.231103] io scheduler deadline registered
[ 15.231134] io scheduler cfq registered (default)
[ 15.231159] io scheduler bfq registered
[ 15.231225] mv_xor_shared mv_xor_shared.0: Marvell shared XOR driver
[ 15.231268] mv_xor_shared mv_xor_shared.1: Marvell shared XOR driver
[ 15.265053] mv_xor mv_xor.0: Marvell XOR: ( xor cpy )
[ 15.305054] mv_xor mv_xor.1: Marvell XOR: ( xor fill cpy )
[ 15.345055] mv_xor mv_xor.2: Marvell XOR: ( xor cpy )
[ 15.385052] mv_xor mv_xor.3: Marvell XOR: ( xor fill cpy )
[ 15.389115] Serial: 8250/16550 driver, 2 ports, IRQ sharing disabled
[ 15.409664] serial8250.0: ttyS0 at MMIO 0xf1012000 (irq = 33) is a 16550A
[ 15.934181] console [ttyS0] enabled
[ 15.943608] brd: module loaded
[ 15.949671] loop: module loaded
[ 15.953695] NAND device: Manufacturer ID: 0x98, Chip ID: 0xda (Toshiba NAND 256MiB 3,3V 8-bit), page size: 2048, OOB size: 64
[ 15.965088] Scanning device for bad blocks
[ 15.969282] Bad eraseblock 0 at 0x000000000000
[ 15.973778] Bad eraseblock 1 at 0x000000020000
[ 15.978293] Bad eraseblock 2 at 0x000000040000
[ 15.982795] Bad eraseblock 3 at 0x000000060000

... And there are two thousand lines of "Bad eraseblock xxx at xxxx"

[ 25.622780] Bad eraseblock 2046 at 0x00000ffc0000
[ 25.627555] Bad eraseblock 2047 at 0x00000ffe0000
[ 25.632292] 4 cmdlinepart partitions found on MTD device orion_nand
[ 25.638601] Creating 4 MTD partitions on "orion_nand":
[ 25.643764] 0x000000000000-0x000000100000 : "u-boot"
[ 25.649716] 0x000000100000-0x000000500000 : "uImage"
[ 25.655502] 0x000000500000-0x000002500000 : "rootfs"
[ 25.661275] 0x000002500000-0x000010000000 : "data"
[ 25.667706] mv643xx_eth: MV-643xx 10/100/1000 ethernet driver version 1.4
[ 25.674608] libphy: mv643xx_eth smi: probed
[ 25.680716] mv643xx_eth_port mv643xx_eth_port.0: eth0: port 0 with MAC address 02:50:43:3d:86:74
[ 25.689625] pch_gbe: EG20T PCH Gigabit Ethernet Driver - version 1.01
[ 25.696180] ehci_hcd: USB 2.0 'Enhanced' Host Controller (EHCI) Driver
[ 25.702780] orion-ehci orion-ehci.0: Marvell Orion EHCI
[ 25.708066] orion-ehci orion-ehci.0: new USB bus registered, assigned bus number 1
[ 25.745036] orion-ehci orion-ehci.0: irq 19, io mem 0xf1050000
[ 25.765015] orion-ehci orion-ehci.0: USB 2.0 started, EHCI 1.00
[ 25.771528] hub 1-0:1.0: USB hub found
[ 25.775331] hub 1-0:1.0: 1 port detected
[ 25.779618] Initializing USB Mass Storage driver...
[ 25.784611] usbcore: registered new interface driver usb-storage
[ 25.790665] USB Mass Storage support registered.
[ 25.795401] usbcore: registered new interface driver libusual
[ 25.801463] mousedev: PS/2 mouse device common for all mice
[ 26.095022] usb 1-1: new high-speed USB device number 2 using orion-ehci
[ 26.246289] hub 1-1:1.0: USB hub found
[ 26.250152] hub 1-1:1.0: 4 ports detected
[ 26.525280] usb 1-1.1: new full-speed USB device number 3 using orion-ehci
[ 26.715280] usb 1-1.4: new high-speed USB device number 4 using orion-ehci
[ 26.815007] rtc-mv rtc-mv: internal RTC not ticking
[ 26.820288] orion_wdt: Initial timeout 21 sec
[ 26.824776] sdhci: Secure Digital Host Controller Interface driver
[ 26.831039] sdhci: Copyright(c) Pierre Ossman
[ 26.838451] scsi0 : usb-storage 1-1.4:1.0
[ 26.875011] mmc0: mvsdio driver initialized, lacking card detect (fall back to polling)
[ 26.883087] sdhci-pltfm: SDHCI platform and OF driver helper
[ 26.888946] Registered led device: plug:red:misc
[ 26.893696] Registered led device: status:green:health
[ 26.899976] Registered led device: status:blue:health
[ 26.907282] usbcore: registered new interface driver r8712u
[ 26.913118] gre: GRE over IPv4 demultiplexor driver
[ 26.918180] TCP: cubic registered
[ 26.921530] NET: Registered protocol family 17
[ 26.926088] lib80211: common routines for IEEE802.11 drivers
[ 26.931798] lib80211_crypt: registered algorithm 'NULL'
[ 26.937114] Key type dns_resolver registered
[ 26.942058] registered taskstats version 1
[ 26.947996] netpoll: netconsole: local port 6665
[ 26.952641] netpoll: netconsole: local IP 10.10.10.3
[ 26.957692] netpoll: netconsole: interface 'eth0'
[ 26.962414] netpoll: netconsole: remote port 6666
[ 26.967162] netpoll: netconsole: remote IP 10.10.10.4
[ 26.972245] netpoll: netconsole: remote ethernet address ff:ff:ff:ff:ff:ff
[ 26.979163] netpoll: netconsole: device eth0 not up yet, forcing it
[ 27.836002] scsi 0:0:0:0: Direct-Access SKYMEDI USB Drive PQ: 0 ANSI: 2
[ 27.845066] sd 0:0:0:0: Attached scsi generic sg0 type 0
[ 27.850612] sd 0:0:0:0: [sda] 32374784 512-byte logical blocks: (16.5 GB/15.4 GiB)
[ 27.859678] sd 0:0:0:0: [sda] Write Protect is off
[ 27.864495] sd 0:0:0:0: [sda] Mode Sense: 23 00 00 00
[ 27.870056] sd 0:0:0:0: [sda] No Caching mode page present
[ 27.875584] sd 0:0:0:0: [sda] Assuming drive cache: write through
[ 27.884549] sd 0:0:0:0: [sda] No Caching mode page present
[ 27.890096] sd 0:0:0:0: [sda] Assuming drive cache: write through
[ 27.897324] sda: sda1
[ 27.901802] sd 0:0:0:0: [sda] No Caching mode page present
[ 27.907365] sd 0:0:0:0: [sda] Assuming drive cache: write through
[ 27.913492] sd 0:0:0:0: [sda] Attached SCSI removable disk
[ 29.466374] mv643xx_eth_port mv643xx_eth_port.0: eth0: link up, 1000 Mb/s, full duplex, flow control disabled
[ 29.508012] console [netcon0] enabled
[ 29.511700] netconsole: network logging started
[ 29.516344] drivers/rtc/hctosys.c: unable to open rtc device (rtc0)
[ 29.522959] Waiting 10sec before mounting root device...
[ 39.539768] kjournald starting. Commit interval 5 seconds
[ 39.548058] EXT3-fs (sda1): using internal journal
[ 39.552905] EXT3-fs (sda1): mounted filesystem with writeback data mode
[ 39.559609] VFS: Mounted root (ext3 filesystem) on device 8:1.
[ 39.567722] devtmpfs: mounted
[ 39.571279] Freeing init memory: 172K
[ 41.024087] systemd-udevd[90]: starting version 195
[ 41.467797] RPC: Registered named UNIX socket transport module.
[ 41.473778] RPC: Registered udp transport module.
[ 41.547352] RPC: Registered tcp transport module.
[ 41.552121] RPC: Registered tcp NFSv4.1 backchannel transport module.
[ 41.666406] usblp 1-1.1:1.0: usblp0: USB Bidirectional printer dev 3 if 0 alt 1 proto 2 vid 0x03F0 pid 0x0C17
[ 41.743002] usbcore: registered new interface driver usblp
[ 41.832866] FS-Cache: Netfs 'nfs' registered for caching
[ 41.895600] cryptodev: driver 1.5 loaded.
[ 42.315740] EXT3-fs (sda1): using internal journal
[ 43.873943] NET: Registered protocol family 10
[ 44.598124] tun: Universal TUN/TAP device driver, 1.6
[ 44.603256] tun: (C) 1999-2004 Max Krasnyansky <maxk@qualcomm.com>
[ 45.409539] Installing knfsd (copyright (C) 1996 okir@monad.swb.de).
[ 63.454461] uncorrectable error :
[ 63.457822] uncorrectable error :
[ 63.461292] end_request: I/O error, dev mtdblock0, sector 0
[ 63.466902] Buffer I/O error on device mtdblock0, logical block 0
[ 63.473263] uncorrectable error :
[ 63.476546] end_request: I/O error, dev mtdblock0, sector 0
[ 63.482332] Buffer I/O error on device mtdblock0, logical block 0
[ 63.488689] uncorrectable error :
[ 63.491951] end_request: I/O error, dev mtdblock0, sector 0
[ 63.497741] Buffer I/O error on device mtdblock0, logical block 0
[ 63.504075] uncorrectable error :
[ 63.507355] end_request: I/O error, dev mtdblock0, sector 0
[ 63.513140] Buffer I/O error on device mtdblock0, logical block 0
[ 63.519470] uncorrectable error :
[ 63.522731] end_request: I/O error, dev mtdblock0, sector 0
[ 63.528523] Buffer I/O error on device mtdblock0, logical block 0
[ 63.534860] end_request: I/O error, dev mtdblock0, sector 0
[ 63.540464] Buffer I/O error on device mtdblock0, logical block 0
[ 63.546799] uncorrectable error :
[ 63.550060] end_request: I/O error, dev mtdblock0, sector 0
[ 63.555851] Buffer I/O error on device mtdblock0, logical block 0
[ 63.562186] uncorrectable error :
[ 63.565464] end_request: I/O error, dev mtdblock0, sector 0
[ 63.571250] Buffer I/O error on device mtdblock0, logical block 0
[ 63.577591] end_request: I/O error, dev mtdblock0, sector 0
[ 63.583200] Buffer I/O error on device mtdblock0, logical block 0
[ 63.589535] uncorrectable error :
[ 63.592796] end_request: I/O error, dev mtdblock0, sector 0
[ 63.598588] Buffer I/O error on device mtdblock0, logical block 0
[ 63.604917] uncorrectable error :
[ 63.608373] uncorrectable error :
[ 63.612000] uncorrectable error :
[ 63.614129] uncorrectable error :
[ 63.617771] uncorrectable error :

...... some lines of uncorrectable error

[ 68.732750] uncorrectable error :
[ 68.734750] uncorrectable error :
[ 68.738275] blk_update_request: 1056 callbacks suppressed
[ 68.743704] end_request: I/O error, dev mtdblock0, sector 0
[ 68.749311] quiet_error: 1056 callbacks suppressed
[ 68.754122] Buffer I/O error on device mtdblock0, logical block 0
[ 68.760504] uncorrectable error :
[ 68.763792] end_request: I/O error, dev mtdblock0, sector 0
[ 68.769584] Buffer I/O error on device mtdblock0, logical block 0
[ 68.775952] uncorrectable error :
[ 68.779238] end_request: I/O error, dev mtdblock0, sector 0
[ 68.785026] Buffer I/O error on device mtdblock0, logical block 0
[ 68.791384] end_request: I/O error, dev mtdblock0, sector 0
[ 68.796993] Buffer I/O error on device mtdblock0, logical block 0
[ 68.803347] uncorrectable error :
[ 68.807644] end_request: I/O error, dev mtdblock0, sector 0
[ 68.813435] Buffer I/O error on device mtdblock0, logical block 0
[ 68.819769] uncorrectable error :
[ 68.823034] end_request: I/O error, dev mtdblock0, sector 0
[ 68.828827] Buffer I/O error on device mtdblock0, logical block 0
[ 68.835173] uncorrectable error :
[ 68.838434] end_request: I/O error, dev mtdblock0, sector 0
[ 68.844226] Buffer I/O error on device mtdblock0, logical block 0
[ 68.850560] uncorrectable error :
[ 68.853825] end_request: I/O error, dev mtdblock0, sector 0
[ 68.859617] Buffer I/O error on device mtdblock0, logical block 0
[ 68.865959] end_request: I/O error, dev mtdblock0, sector 0
[ 68.871566] Buffer I/O error on device mtdblock0, logical block 0
[ 68.877900] uncorrectable error :
[ 68.881162] end_request: I/O error, dev mtdblock0, sector 0
[ 68.886954] Buffer I/O error on device mtdblock0, logical block 0
[ 68.893284] uncorrectable error :
[ 68.896739] uncorrectable error :
[ 68.900368] uncorrectable error :

...... some lines of uncorrectable error

[ 69.837243] uncorrectable error :
[ 69.841019] uncorrectable error :
[ 69.844462] uncorrectable error :
[ 69.846835] uncorrectable error :
[ 69.853499] uncorrectable error :
[ 69.855664] uncorrectable error :
[ 109.913262] uncorrectable error :
[ 109.915303] uncorrectable error :
[ 109.918757] blk_update_request: 531 callbacks suppressed
[ 109.924094] end_request: I/O error, dev mtdblock0, sector 0
[ 109.929695] quiet_error: 531 callbacks suppressed
[ 109.934419] Buffer I/O error on device mtdblock0, logical block 0
[ 109.940804] end_request: I/O error, dev mtdblock0, sector 0
[ 109.946414] Buffer I/O error on device mtdblock0, logical block 0
[ 109.952825] end_request: I/O error, dev mtdblock0, sector 0
[ 109.958430] Buffer I/O error on device mtdblock0, logical block 0
[ 109.964801] end_request: I/O error, dev mtdblock0, sector 0
[ 109.970411] Buffer I/O error on device mtdblock0, logical block 0
[ 109.976755] end_request: I/O error, dev mtdblock0, sector 0
[ 109.982365] Buffer I/O error on device mtdblock0, logical block 0
[ 109.988706] end_request: I/O error, dev mtdblock0, sector 0
[ 109.994311] Buffer I/O error on device mtdblock0, logical block 0
[ 110.000669] uncorrectable error :
[ 110.003935] end_request: I/O error, dev mtdblock0, sector 0
[ 110.009726] Buffer I/O error on device mtdblock0, logical block 0
[ 110.016080] uncorrectable error :
[ 110.019342] end_request: I/O error, dev mtdblock0, sector 0
[ 110.025133] Buffer I/O error on device mtdblock0, logical block 0
[ 110.031466] uncorrectable error :
[ 110.034882] end_request: I/O error, dev mtdblock0, sector 0
[ 110.040848] Buffer I/O error on device mtdblock0, logical block 0
[ 110.047619] uncorrectable error :
[ 110.052522] end_request: I/O error, dev mtdblock0, sector 0
[ 110.058671] Buffer I/O error on device mtdblock0, logical block 0
[ 110.067252] uncorrectable error :
[ 110.071169] uncorrectable error :

...... some lines of uncorrectable error
')

[Kurlon]

Found the error:

Machine: Marvell SheevaPlug Reference Board

Your uboot env doesn't include the right arcNumber setting. You need to change that to 3089 so the kernel recognizes it's on a GoFlex Net with dual SATA ports and you should be good to go.

[hamal]

$ fw_printenv
Cannot parse config file: Invalid argument

$ sudo /usr/sbin/fw_setenv arcNumber 3089
Cannot parse config file: Invalid argument


I checked my /etc/fw_env.config and uncomment the lines for dockstar.
Try fw_printenv again and I get this error message.


$ fw_printenv
Too few good blocks within range

$ /usr/sbin/fw_setenv arcNumber 3089
Too few good blocks within range

[Kurlon]

Your best bet is likely going to be direct uBoot access, either via a serial console cable, or netconsole.

http://archlinuxarm.org/platforms/armv5 ... goflex-net has some notes on using netconsole. Once you can observe and interrupt uboot you can update the arcNumber value from there.

[hamal]

I was unable to interrupt uboot.

With this command, I was able to see uboot messages.
nc -l -u -p 6666

I opened another terminal to send message.
I tried
nc -u 10.10.10.6 6666
and
nc -u 10.10.10.6 6666

when it started to count down in the first console, I stroke some keys in the second terminal.
but nothing happened. my goflex net just keep booting up.

[moonman]

You need linux. Mac or windows wont work. Fire up (k)ubuntu, either in vm or livecd. In VM make sure your network adapter is in bridged mode.

[sambul13]

ASUC works in Windows XP extremely well for both watching and editing Uboot env in the same window. In Win7 you may have some issues with entering commands in ASUC. Don't forget to switch your firewall off. Also click inside the window, then Ctrl+J to interrupt boot. Keep repeating it until you get it.

$this->bbcode_second_pass_quote('moonman', 'M')ac or windows wont work.